Aaron Kimball

The web-app servlet files are relative to the cwd and this requires being in usb/adam/, not usb/

Users may need to add HADOOP_HOME components to their classpath to leverage parquet. The compute-adam-classpath.sh script does not add any hadoop-common/hadoop-core/hadoop-client/etc jars to the classpath. The `java parquet.hadoop.PrintFooter adam/NA12878.adam` command...

The ADAM files in my dir are 192KB, vs. 250KB for the SAM format. This is a 25% size reduction, not 50% :)

This directory is already included in the zip file that the users download; as such, the Spark job to generate the dir fails with o.a.h.fs.FileAlreadyExistsException

With unreliable internet, the 'localhost:8080/freq' and 'localhost:8080/reads' pages in the ADAM web app will not render correctly because they rely on 3rd party js and/or css which should be localized.

See kicanvas view at https://kicanvas.org/?github=https%3A%2F%2Fgithub.com%2Fkimballa%2Fvoltage-ref-cal%2Fblob%2Fmain%2Fvoltage%2520ref%2520calibration%2520tool.kicad_pcb KiCanvas screenshot:  KiCAD 8.0.2 screenshot:  Test point footprints display their refdes on both the F.silks and B.silks layers; one of these is the...