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quickmerge aborted

8

Hi, I am getting this error while running quickmerge quickmerge -d out.rq.delta -q IPA.fasta -r hifi-hybrid.fasta -hco 5.0 -c 1.5 -l n -ml m -p prefix 0 quickmerge 1 -d...

How to find which coordinates are repeating in target chromosomes

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Hi, It is very useful tool and the graphics are amazing. However, I have some issues if you can address 1. How to add color to the synteny analysis as...

Empty overlap set!

4

Hi, I am running below command to get the polished sequences from my assembly ./racon raw.fastq (pacbioreads) overlap.paf (minimap2) assembly.fast (Hifiasm file) However, I am receiving this error message [racon::Polisher::initialize]...

I would like to automate BioCircos plot in R and here is my code. However, I am not able to link the tracks when I am using the full file....