kew24

Instead of requiring the index to be named prefix.bam/.cram + index extension, this pull request allows for the index to be named prefix + index extension. I've essentially just removed...

single space as delimiter

1

Currently, with whitespace as a separator, consecutive whitespaces are merged. However, if I have a file that is delimited by _single spaces_, I can't seem to make it recognize I...

Users can choose their own `percent.mt` column name to fetch from their data, and the resulting column is subsequently renamed in as `"percent.mt"` in `my_data`: https://github.com/satijalab/seurat-wrappers/blob/8d46d6c47c089e193fe5c02a8c23970715918aa9/R/miqc.R#L57-L58 However, when subsetting on...

Just a quick fix to use the _splitting_ variable in the warning, not the _coloring_ variable, for a more accurate/useful warning message.

JBrowse issue: "bad file descriptor"

15

I got this error from JBrowse, here is the stack trace: ``` Error: EBADF: bad file descriptor, close No stack trace available ``` Upon initially loading in a fasta +...

Just fixed a quick typo on the SnpSift dbNSFP page. Thanks!