Kevin Myers

Citation?

3

I want to cite TreeViewer in a manuscript. Is there a citation I should use or just link to the GitHub?

I ran `pip install auto_ml` and got the following error: ``` Collecting auto_ml Using cached auto_ml-2.9.10-py2.py3-none-any.whl (71 kB) Collecting dill=0.2.5 (from auto_ml) Using cached dill-0.2.9.tar.gz (150 kB) Preparing metadata (setup.py)...

Making tree from large dataset

5

I want to use RAxML-ng to make a tree for 4,823 species (from NCBI Representative and Reference genome list). I used [GTDB-Tk](https://gtdb.ecogenomic.org) to construct the alignment from the [Bac120](https://data.ace.uq.edu.au/public/gtdb/data/releases/latest/) marker...

Hanging at Parsing MSA

4

We are attempting to make a tree using RAxML-ng adaptive (v1.2.1-adaptive). The alignment file (attached in .txt form for GitHub) was created using `jackhmmer` in Stockholm format and then converted...