keksundso

In the _diffexp_ section of the example _config.yaml_ the two variables _base_level_ and _level_of_interest_ are set to A, B, and C, which are the sample names defined in _samples.tsv_. However,...

TPM values depend on Combination

2

Using sleuth I can calculate the TPM-Value of a gene in a Sample (sleuth_prep followed by sleuth_to_matrix). Now if I have 6 samples (6 abundance tables from Kallisto) with two...

The infographic defines the `Jaccard(A,B) = length(Intersion)/[ length(Union) - length(Intersection) ] ` this differs to the standard defintion of the jaccard index with `Jaccard(A,B) = length(Intersection)/ length(Union) ` 1. The...