kehan liu

老师您好， diffab 的功能好强，给抗体设计产生了很多想象的空间，您太棒了！赞一个！ ..en, 我在google colab 上捣鼓了一下代码，链接如下，运行测试出现如下问题，能否麻烦您帮看一下，应该怎么解决： https://colab.research.google.com/drive/1O4vz0A-Y84sOE3dAjePAhL_VmYFhZe8A?usp=share_link python /content/diffab/design_pdb.py /content/diffab/data/examples/7DK2_AB_C.pdb --config /content/diffab/configs/test/codesign_single.yml Python 3.8.15 [INFO] Renumbered chain A (H) [INFO] Renumbered chain B (K) [INFO] Chain C does not...

Appreciate your outstanding work! 请教一下， 1.helixfold3 可以设置条件约束吗，比如进行蛋白-蛋白复合物预测时，指定氨基酸的距离 作为条件约束；如果可以，应该怎么设置? 2. 如果对同一个蛋白a与其他蛋白互作的预测，其蛋白a 的MSA 在重复使用时，能否自定义模板MSA，跳过搜索模板 以节省时间；

Hi, Thank you for your great work on DeepInteract! I would like to request an alternate download method for the PSAIA source file, currently available at: http://complex.zesoi.fer.hr/data/PSAIA-1.0-source.tar.gz Unfortunately, this link...

GPU version, mmseqs expandaln err : getData: local id (4294967295) >= db size (17)

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INFO:colabfold.mmseqs.search:Running mmseqs expandaln out3/qdb /mnt/d/conda/jupyter/ColabFold/database/uniref30_2302_gpu.idx out3/res /mnt/d/conda/jupyter/ColabFold/database/uniref30_2302_gpu.idx out3/res_exp --db-load-mode 0 --threads 18 --expansion-mode 0 -e inf --expand-filter-clusters 1 --max-seq-id 0.95 expandaln out3/qdb /mnt/d/conda/jupyter/ColabFold/database/uniref30_2302_gpu.idx out3/res /mnt/d/conda/jupyter/ColabFold/database/uniref30_2302_gpu.idx out3/res_exp --db-load-mode 0 --threads 18...