kebern

Results 5 comments of kebern

Possible run with k gretter than 63

Thank you Johnlees. I would like to have a possibility to work with gretter k (like k-mer=81), because at the end I can find the specific SNP for each node...

Possible run with k gretter than 63

Thank you Johnlees. BK.

qq-plot interpretation after the linear mixed model.

Hi, Thank you. My sample size was 593 with 350 sample as "0" and 243 as "1" in my phenotype file. How to do if I want that the variant...

qq-plot interpretation after the linear mixed model.

So, I can remove all variants with "bad_chisq" before do qq-plot and calculate p-value threshold for significant variants? Thank. B.

qq-plot interpretation after the linear mixed model.

Hi, How you define unique pattern of variants, it's those who have the same estimation of "allele frequency, p-value, lrt-pvalue, beta, etc". So the threshold would be 0.05/numbers of unique...