Bipin Kumar

[feature request] Add support for GNU make's staged install via DESTDIR flag

1

i am trying to package adapterremoval for [Bioarchlinux](https://github.com/BioArchLinux/Packages) project. arch build system makes use of GNU make's [staged install](https://www.gnu.org/prep/standards/html_node/DESTDIR.html#DESTDIR) process to create packages. adapterremoval's Makefile currently do not contain `$(DESTDIR)`...

Use OS/system packaged sdsl library

10

## Platform - SeqAn version: 3.2.0 - Operating system: Archlinux - Compiler: gcc 13.1.1 ## Question Is there a way to use sdsl library packaged in distribution repository? we have...

Issues with building diamond with zstd support

2

i am trying to build and package diamond with zstd support under Archlinux per the instructions given in the [wiki](https://github.com/bbuchfink/diamond/wiki/2.-Installation). I have version both zlib and zstd installed below is...

Ctest failing while building with cmake

1

I am attempting to package FastANI on behalf of [bioarchlinux ](https://github.com/BioArchLinux/Packages)project. while building using cmake with following build options i am encountering errors with ctest ``` # cmake -B build...

issues with compilation

3

i am trying to package pplacer for arch linux. as part of the process i followed instructions given [here](http://matsen.github.io/pplacer/compiling.html) while following the instruction initializing opam and installing dependencies i getting...

Fiji fails to build using maven

3

I am trying to build fiji using maven in the hopes of it can be packged for third party [Archlinux repo](https://github.com/BioArchLinux) of biology tools maintained by volunteers. the objective is...

hadoop-bam and typesafe repo url were using http preventing maven from downloading sources

first of all i would like to thank you for adding support for adding support for staged install as suggested in issue #61. binaries produced by current Makefile lack common...

Build issue under arch linux: support for `DESTDIR` flags in `make install`

5

i am trying to build and package spaln for [BioArchlinux project](https://github.com/BioArchLinux/Packages). i have ran into issues at the actual package creation step. Arch Linux build script relies on [gnu make's...

Build Failure on arch linux [error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘subarray’]

1

While attempting to build hdbscan version 0.8.40 under archlinux i am encountering build failure the build script looks like this ```bash build() { cd "${srcdir}"/${_name}-${pkgver} python -m build --wheel --no-isolation...