Krešimir Beštak

Hi @constantinpape, thank you for such a quick response! That all sounds great thank you! I'll keep an eye on for the CLI script after which I'll test out whether...

A short update here, from the mamba installation, it was extremely easy to get a hosted Docker container as a Seqera container available as: community.wave.seqera.io/library/micro_sam:1.0.1--8aeb5052332a2952

Hi @anwai98, thanks a lot for making this! I might have found an issue with the napari.util [try - except block](https://github.com/computational-cell-analytics/micro-sam/blob/433bd6a152066b3c2634a2cde0408995d9b617c4/micro_sam/util.py#L41) First, for full context, here is the build page...

Hi @anwai98, thanks for the tip! excluding `napari`, `magicgui` and `pyqt` from the environment list, cloning the repo into the Docker image and adding pip install -e . fixed all...