Kai Blumberg

Results 116 comments of Kai Blumberg

From this paper [Microbial ecology of expanding oxygen minimum zones](https://www.nature.com/articles/nrmicro2778) They give the definition: ``` Oxygen minimum zones (OMZs) are oxygen-starved regions of the ocean that are currently expanding owing...

Thanks @nicholascar for the feedback examining the owl code for [marine oxygen minimum zone](http://purl.obolibrary.org/obo/ENVO_01000065) we have the following: ``` AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Oxygen_minimum_zone") "A marine water mass which is characterized by having...

I'm not sure at the moment what the right thing to do with `amount` is other than work on it in PATO to make it more general? Those `amount of...

@pbuttigieg if you want I can add the terms `humidity of soil` and `color of soil` terms using the [entity_attribute](https://github.com/EnvironmentOntology/envo/blob/master/src/envo/modules/entity_attribute.csv) DOSDP module (without the synonyms), if you that covers these...

@cmungall regarding `concentration of organic material in soil` Is it OK to use an ENVO term (organic material) in the `CHEMICAL` slot rather than a CHEBI term? In the DOSDP...

@celineaubert regarding `humidity of soil`, it seems what you need here is `moisture of soil` I think we can do as I suggested in [946](https://github.com/environmentontology/envo/issues/946#issuecomment-642152080) using PATO:[water composition](http://purl.obolibrary.org/obo/PATO_0001800), to precompose...

Hey @celineaubert and @marieALaporte (cc @cmungall @ddooley @wdduncan) sorry for the long slow response, unfortunately we have very little time to dedicate relative to the amount of terms incoming I...

@marieALaporte great question. You are most welcome to make one or several pull requests. We can review your terms either as a pull requests (perhaps better for the design patterns?)...

Thanks @dr-shorthair I'm between jobs at the moment, so on vacation not working. As for the terms, ENVO is pretty strict about definitions and would ask for term contributions to...

The original definitions are very thorough it's more a formatting thing we prefer things be very strictly in the form "A is a B which C's". Moving the original definitions...