Jonas Windhager

CLI: config file autodiscovery doesn't work as expected

4

https://github.com/phpList/phplist3/blob/master/public_html/lists/admin/index.php#L68 I think lines 68 and 70 should be changed from: `$configfile = '../config/config.php';` to: `$configfile = dirname(__FILE__).'../config/config.php';`

Increasing max nearest neighbors did not result in finding all training arcs

3

In the "Tracking with Learning" workflow (after importing a "Training" project as "Training with Learning"), when calculating the tracking weights, the progress window "halts", the weights aren't updated and the...

See #155

intensities/regionprops measurement of potentially corrupted TIFF files crashes with empty error message

1

@MureziCapaul

``` ERROR steinbock.preprocessing.imc - Error reading file raw/20220819_MC_NSCLCTcellexh_87C_1/20220819_MC_NSCLCTcellexh_87C_1/20220819_MC_NSCLC_Tcellexh_87C_1.mcd: sequence item 0: expected str instance, PosixPath found Traceback (most recent call last): File "/app/steinbock/steinbock/preprocessing/imc.py", line 341, in _try_preprocess_mcd_images_from_disk recovery_txt_file = _match_txt_file(...

Add cellpose support

1

Maybe even with re-training?