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HOC dataset for SCIFIVE

1

Hi, I noticed that there are two versions of hoc dataset, one is originally sentence-level, and the other is modified by BLURB dataset to abstract-level. Which hoc dataset does SCIFIVE...

zoeyhl

biot5x/examples/finetunning_biot5x_blurb.ipynb has a problem as to typing_extensions.

2

After compliting the `gsutil` step and then during executing the `biot5x/src/finetune_biot5x.py`, I encountered the following error: ``` ~/.local/lib/python3.8/site-packages/tensorflow/python/types/trace.py in 29 from typing import Any, List, Optional, Sequence 30 ---> 31...

yayamamo

hugging face models do not work

4

Hi, Thanks for your great contribution in biomedical domain. I tried all the models in the hugging face format and I couldn't replicate any of the results or even get...

MHDBST

Do the gs: files in the code still exist?

2

I am trying out the code in scifive_pretrain_base.ipynb. I got OSError: Unable to open file for all the gs: files in the code 'gs://t5_training/t5-data/config/pretrained_models_google_base_operative_config.gin' gs://mindxhack/bio_sentence_piece_small.txt I tried look them up...

bhomass

RE example doesn't work

2

Hello, your examples for relation extraction don't work. Could you please check that?

zhaoli2017

Is there a way to answer yes/no questions with the SciFive models on Huggingface?

nimahassanpour

MostHumble