svaseq
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Analysis for svaseq paper
Hi Currently, I am trying to remove known batch effect using sva and BatchQC on express data: dds from DESeq2, suggested by Dr Jeffrey T. Leek (http://jtleek.com/genstats/inst/doc/02_13_batch-effects.html) got two following...
Hi, I am investigating age-related gene expression changes across different tissue regions with RNA-seq data using DESeq2. A part of my coldata looks like(I have a total of 100 samples)...
Hi Jeff, I tried to apply SVA to a set of data but encountered some problems. If I ran command `svaObj