Stephan Heunis
Stephan Heunis
It looks like all OpenNeuro datasets added to the [datasets repo ](https://github.com/OpenNeuroDatasets) on/after 21 October 2021 are not complete datalad datasets, where those added before then are. The non-datalad datasets...
> > - as you mentioned DataLad dataset can contain multiple BIDS datasets -- we would need to stick nested datasets metadata description somewhere too ideally, and then traverse files...
> I would like also to check how much/far we can get with https://github.com/ANCPLabOldenburg/ancp-bids which should be more lightweight, represent/use current bids schema , and be coinstallable in modern system...
See `generic_json` functionality introduced/updated in https://github.com/datalad/datalad-metalad/pull/353 Investigate whether BIDS file extractor can derive from the `generic_json` extractor, given the sidecar functionality that it provides. Also usable on dataset level?
I'm wondering if it would be useful to add a run-procedure to this extension to configure BIDS+datalad datasets such that all files in the root BIDS directory are committed to...
It would be useful if the bids extractor (and for some points, eventually all other extractors in this extension) could: - be compatible with the new generation of metadata handling,...
For the updated [BIDS extractor](https://github.com/datalad/datalad-neuroimaging/issues/94) I'm reading information intended for a generic `description` field from any `README` files in the datalad dataset. This would be for example: `README.md`, `README.rst`, `README.txt`...
I'm interested in spending some time on general maintenance of this extension, and eventually updating all of the extractors to be compatible with the first release of `datalad-metalad`. This interest...
This is for the SHACL generator in response to https://github.com/linkml/linkml/issues/1618. Code is added to `shaclgen.py` to: - allow users to specify the --include-annotations tag if they want annotations (on classes,...