Julianus Pfeuffer

Results 225 issues of Julianus Pfeuffer

### Report All big search engines support multiple enzymes. So should we in our data structures! We had the request already multiple times in quantms. Luckily it was often lysC...

### Report I think there have been almost a dozen releases since ours. We should give it a try. Including memory and some speed improvements. As well as new functionality....

Although matplotlib and pandas are very common dependencies they are very heavy. Both in the sense of maintenance (since they are under heavy development) and in the sense of transitive...

pyOpenMS

## Description ## Checklist - [ ] Make sure that you are listed in the AUTHORS file - [ ] Add relevant changes and new features to the CHANGELOG file...

`nogil` at function definitions does not do anything it only signals to users/developers that it is safe to use without gil. Which is actually not true in 90% of the...

If someone just wants to read an mzml into numpy without storing in MSExperiment. Probably you can just write a DataConsumer in Cython for our consumer is interface (MzMLFile.pyx) that...

Since dmg cannot be built on GHA. https://github.com/OpenMS/OpenMS/suites/15416515601/artifacts/880380501 Download. Unzip. Probably CMD+Right-click -> Open. Allow untrusted developers. Install. Currently only installs into global /Applications and requires admin rights.

wontfix

## Description For potential p-value aggregation approaches. ## Checklist - [ ] Make sure that you are listed in the AUTHORS file - [ ] Add relevant changes and new...

Recently, with the new class docu and typing support, the splitting into submodules pyopenms_1 to n is suboptimal since not all tools are considering the init.py in which we pull...

enhancement
wontfix
pyOpenMS