Julianus Pfeuffer

I mean to use https://github.com/OpenMS/OpenMS/pull/6267 or something similar to make SpectrumAccess abstract over different underlying Spectrum data layouts. Something like a new PeakAccess? You will have different runtimes for different...

Hi! A PR for arm CI is here #7811 With this there could be a docker container as a next step. For Conda a separate PR would be necessary on...

Oh yes, if you have not built the documentation with doxygen yet, the html will be useless. Unfortunately documentation is too tightly integrated into the build system such that you...

Seems like some packages might be missing specifically for AL2023. Xerces-c Coin-or If you can get them from some Fedora repo or COPR or build them with our contrib, or...

bioconda builds for linux and osx ARM now. So do we. Please check the builds scripts in either place on how to replicate or just install the binaries now.

Are you recompiling contrib (i.e. coinmp) with the compilers, too? Just to rule it out. Or are you using the prebuilt libraries from your conda environment as "contrib"? I checked...

Yeah but even after more than 30 years it is still unclear in front of the law if GPL infects other licenses through linking or not.

You will not be able to fix it until you do a full integration on the Cython level. https://github.com/OpenMS/pyopenms-docs/issues/458 https://github.com/OpenMS/pyopenms-docs/issues/422

When you get something returned from a Cython function it will be an MSSpectrum, not the aliased MSSpectrumDF.

Would also be WAY faster if you would just build arrow-based columns in the pyx instead of doing it in python as you do right now.