joy

Hi there, I faced the same error and I managed to perform this step like this. `bcftools norm --threads 8 -f REFERENCE -m - INPUT_VCF 2> LOG| \ vcfallelicprimitives -g...

Hi @m-lazarova, I get the same error and I got no clue on how to fix it. Did you managed to solve it? Thanks

@a00101 and @christinafliege Did you solve the issue? How did you do? Because I get the same error but I have noclue about how to fix it. Thanks!

I had the same error @mdbloice how can we solve? Thanks