Joseph W. Brown
Joseph W. Brown
Oh and no tree files are made for the uppermost folder.
I would've thought brew would have handles all of the dependencies and should have just installed binaries. Are you on mac or linux? What happens when you type: ``` brew...
I will try to get my hands on a mac and do a fresh install.
@laluciav I got hold of a mac. I removed homebrew completely and installed phyx. If you only installed homebrew to get phyx then you should probably do a fresh install...
@sbrobeson You can compile it with: ``` make pxssplit ``` The fact that it is not in the default list of programs to compile means that it _might_ not be...
Oof yeah this is not functional atm. I can get it working if that is what you need.
The "command not found" message means you have compiled them, but not installed them. `make install` will install any phyx program that has been compiled; i.e., you can call it...
That is how I am leaning as well, although this was put on the back burner. Thanks for letting me know your preference.
Yikes! I will look at it. Thanks for the issue.
Regarding 3, that was a choice to go with aligned sequences. I'll think about relaxing this constraint. But an easy way around this at the moment is to just do...