jordandouglas

icon company School of Computer Science icon location University of Auckland, New Zealand icon location Computational biology

Results 2 comments of jordandouglas

Negative branch length check in tree likelihood

For example, I have had problems with origin branches, where the origin is a realparameter, and its lower bound changes with the tree. A perfectly legal tree operator could move...

java.lang.NullPointerException: Cannot invoke "beast.base.evolution.tree.Node.getNr()" because "<local2>" is null

Hi, I was able to reproduce this issue using your xml file. There appears to be a bad interaction between the EpochFlexOperator and clock model. We are working on this...