Jordan

I also found that the bed files converted from the same bam file using `macs2 randsample` and `bedtools bamtobed` were not identical, but I don't why... Probably this is why...

@mjoppich Same situation here. Have you found any solution? Thanks.

Same problem here. Currently I can only work around it with `cores=1`.

@kehuangke @Cristinex @pcantalupo After looking into the code of `selectFeature()`, I think `linearModel()` function might be the reason of this. In `linearModel()`, the dropout rate of a feature was defined...

@poddar19 I am wondering if batch effect in the merged object should be regress out? The thing is that after regressing out batch effect with Seurat Integration process, I lost...

@dppss90008 Sweet, this works!!

I have encountered the similar issue and managed to solve it. For some reasons, in one species, if most of the gene IDs in the FASTA and h5ad were not...

I have encountered the same issue while running `sm.run(pairwise=True)`. Any work around please?