Jonas Andreas Sibbesen

Hi Jordi, `combine` only solves the multi-allelic problem and does not sort the variants. Sorry that this was not clear from my previous message. Regarding the other errors, would it...

Hi Jordi, I will look into it later in the week and will let you know when the new release is available. Best, Jonas

Hi Jordi, Sorry for the silence. I did unfortunately not have time to finish the release last week and in the beginning of this week I have been really busy...

Hi Jordi, The new release is now available ([v1.5](https://github.com/bioinformatics-centre/BayesTyper/releases/tag/v1.5)). Let me know if you run into any problems. Best, Jonas

Hi Jordi, Would it be possible for you to share the vcf file from whamg that results in the regex error? Also, are you compiling BayesTyper yourself or using the...

Hi Jordi, Sorry for the silence, I have been on vacation for the last couple of days. You can send the file to me at [email protected] All the symbolic alleles...

Thank you for sending the file, Jordi. I found the issue and it is a limitation of our vcf parser. Currently it can not parse fields/attributes with a "number" of...

That is strange. It worked fine for me when I tried it on the vcf file you send me (insilico3_tumor.vcf) after I removed that line from the header. Is it...

Hi Jordi, Sorry for the silence. Have been traveling and on vacation for last couple of weeks. Yes, the really long strings are correct. `convertAllele` converts symbolic alternative alleles (e.g....

Dear Jordi, Thank you for writing. It is currently not possible to run BayesTyper on more than 30 samples at a time. Therefore, as you also mentions, you will need...