joaomamede

Pymouse / PyMouseEvent .run() doesn't resume function after .stop() is called

3

This is a linux machine. This was working 3/4 years ago when I wrote it and now it's buggy. ``` from pymouse import PyMouse from pymouse import PyMouseEvent from pykeyboard...

Cloudflared connection via account

3

Hello, I would like to start a cloudflare argo tunnel through my cloudflare account and application that is well configured. As I see from the code it's not possible to...

Any plans for "on demand"

5

Hi, thank you for nvidia-prime-select. The ubuntu prime-select has a "on demand" feature, that uses the intel card for graphics rendering but still leaves the nvidia modules loaded. Meaning we...

Tensorflow is supposed to run with them. Do we absolutely need nvidia/CUDA? Thanks in advance.

How do we create a data interface without segmentations for prediction only? [Help Wanted]

1

Hi all, I tried to create a Data_IO without segmentations.nii.gz and only the imaging data, but it fails when the file is not present. I trained the model already, it's...

Add XY metadata

2

Added code to include X and Y stage position in the metadata dictionary.

When opening a .nd2 that was deconvolved that has intensity values higher than 65535.0, they don't get recognized and the image doesn't render well. ``` from nd2reader import ND2Reader a...

Improving metadata: Add X and Y stage coordinates in Metadata.

3

Adding this to the code seems to do the trick. *same as z_coordinates" ``` def get_parsed_metadata(self): """Returns the parsed metadata in dictionary form. Returns: dict: the parsed metadata """ if...

reading from files being written

4

Do you think it's possible to read data from files from experiments currently being acquired(extremely long time lapses?). The idea would be to manually shape the reader. We want to...

Bad reader sizes are parsed.

1

Hi, nd2reader is having trouble reading a file as it finds "Zs" that are not there. Image was acquired with triggered imaging 1 Z, 120T, 2044 Y, 2048 X, 24...