Dr Joao Luiz

icon company University of Glasgow icon location Glasgow icon location PhD in Immunology. MRC Researcher Co-Investigator at the School of Infection and Immunity, University of Glasgow.

Results 3 comments of Dr Joao Luiz

Unable to download package

Hello @hpliner , I am also having an issue trying to install devtools::install_github("cole-trapnell-lab/garnett", ref="monocle3"). Using github PAT from envvar GITHUB_PAT Downloading GitHub repo cole-trapnell-lab/garnett@monocle3 Skipping 6 packages not available: org.Mm.eg.db,...

[Visualisation] Baysor-like output

Hi. @EliHei2 , I am running the 'Introduction to Segger" from the Tutorial section with the xenium example data. I had the exact same issue as @jpark27 when trying to...

segger in COSMX data - data generation step

Hi @EliHei2 , Thanks for the quick response. I thought that could be a reason for the bug, hence I tried to adjust the settings for the transcript neighbours and...