John Chilton

I'm going to put this into WIP until that test passes, is that okay?

Taking a quick look at that.

I want to steal the code in here for running the tool shed via pytest... should I be patient and let this work out though? Is there something I can...

The file sources can already have non-gxfiles prefixes - e.g. gxftp:// works. I'm certainly a solid +1 on a generalization of stream_url_to_file that can take in the components accessible by...

Yes - please take it over that would be great! Hard to say what more is needed without tests - but I remember this being pretty close and I don't...

Looks really good so far - thanks for all the work on this - amazing stuff.

I agree broadly that a variety of different uploads scenarios should be supported that aren't currently supported. But the upload tool is how we get data into Galaxy - for...

Thanks for the detailed issue report and fix @peterjc! First - I apologize for sticking an @ in there, seems that was a huge mistake on my part. That said...

Awesome feature - thanks a ton @msauria! So this needs to merged or rebased against the latest dev branch to resolve the merge conflicts. I spent a couple minutes just...

I'd recommend breaking this up into a series of PRs of increasing controversy so we can weigh in on the issues individually. Whether an output dataset is hidden or visible...