lichun

functions for DEG analysis

1

Dear cellxgene_vip authors, I am looking into the script used for DEG analysis VIPInterface.py and can't figure out where function "compute_diffexp_ttest" come from. I guess it is corresponding to the...

will the trained model work for seq short than 4096

1

Hi, thanks for your great work! I am wondering whether you model will work for input sequence short than 4096 bp? I am trying to predict random sequence's expression activity...

Can I run the pretrained-model with CPU only cluster

1

Dear BioGPT authors, Can I run the pretrained large BioGPT model with CPU only cluster? If so, how? I didn't see any relevant information. Thanks! Lichun