Jérôme Dockès

Thanks for the suggestion! To make the discussion more concrete could you maybe provide a short script showing what you are currently doing (using one of the atlases provided in...

Hello @DasDominus do you plan to provide an example showing why it would be worth adding that option to `plot_roi`? my impression is we might not change plot_roi but it...

Thanks. IIUC you want to plot only a subset of the atlas regions. You don't need to create separate images for each region then put them back together nor to...

I believe the example above shows how to do this relatively easily and we want to keep the plot_roi signature simple so I will close this issue

Even when resampling to the 2-mm MNI template the issue occurs: ```python from nilearn import masking, datasets, plotting mni = datasets.load_mni152_template(2) mask = masking.compute_brain_mask(mni, mask_type="gm") plotting.plot_roi(mask, display_mode="z", cut_coords=10) ``` ...

what `compute_brain_mask` does is: - resample the template to the target image's resolution - threshold it so both the template (wm, gm, whole-brain) and the target image's resolution (affine) influence...

@LeiGuo0812 if you are having trouble with GitHub and how to open pull requests etc. let us know we are happy to help

Thanks for reporting! looking at the first test in the diff you provide (test_plot_functions_3d_default_params) I see that it is parametrized with a set, whose order is not deterministic, so test...

Hi with `view_surf` you can only control the font size at the moment. using `plot_surf` you will get as a return value either a matplotlib figure or a plotly figure...

# `fetch_atlas_allen_2011` - only used in one plotting example (`01_plotting/plot_prob_atlas.py`) where it can easily be replaced by eg harvard-oxford - the interface and documentation are confusing, eg the tuple of...