jeffchen2000

Great, thank you so much! I will try and let you know. Again, thanks a lot. Xianfeng Chen From: Nico B. ***@***.***> Sent: Monday, May 22, 2023 1:51 AM To:...

hi Bnpc team seems --fixed_assignment implemented is not what I want. I want the cluster and mutation to be fixed like below (this can be from another study, and they...

Thanks for the quick response! it worked when I used the input format like below (tab delimited), it seems BnpC can auto-detect the column/row names ID cell1 cell2 cell3 mutation1...

Hi NBMueller Thanks for your quick response! Yea, moving it to the input arguments will be better. and also, thanks for providing me the information about generating a tree file...

hi NBMueller thanks for your comments, when I set the "-ap 1 1", the resulting clusters sometimes reduced and sometimes did not. I realized that the random seed makes huge...