jdhayhurst

not sure if still an issue?

1. assess users' (curators) requirements 2. make more user friendly e.g. interactive cli 3. sequence of operations like petl exec chaining idea (handled by the above) 4. deprecate sum-stats-formatter and...

still an issue

multiple files are transferred if you transfer a folder of files. This can be done with the globus CLI or globus APIs

In the meantime I've set the values for unpublished reason and unpublished date to NULL in curation db for these studies: GCST90000295, GCST90000294, GCST90000461. This should have been what steps...

The two statements below yield exactly the same id's, yet the pruning step performs (2), which is more opaque. So it would seem that we can modify the pruning script...

@sprintell To identify studies in the db that are in both published and unpublished states: ``` select * from study S, housekeeping HK where S.HOUSEKEEPING_ID = HK.ID AND hk.is_published =...

For clarity, GCST90012102 is different in that it appears in the database as 'unpublished' - it's not in both states. However, it may be a victim of a related issue...

I don't know if this is still an issue

still an issue