jchariker

Optimal setting to identify alternate 3' and 5' ends

3

Hi, I'm interested in identifying alternate 3' and 5' ends of transcripts. What would be the best settings for this? I see the options --5p and --3p in talon_initialize_database, but...

Load10X_Spatial with multimodal data

2

Hi, I have Visium slides with gene expression and antibody capture. When using Load10X_Spatial, I get the following error. **Genome matrix has multiple modalities, returning a list of matrices for...

**Operating system** Linux computer cluster **Package name** isoseq3 v3.8.2 **Conda environment** ```# Name Version Build Channel _libgcc_mutex 0.1 main _openmp_mutex 5.1 1_gnu avro-python3 1.9.0 py37_0 bioconda blas 1.0 mkl brotlipy...