Justin Bedő

somatic calling: inconsistent ploidy

5

**Describe the bug** Calls in the same phase set have different plodies. **Version** ```shell $ octopus --version octopus version 0.7.4 Target: x86_64 Linux 3.10.0-957.5.1.el7.x86_64 SIMD extension: AVX2 Compiler: GNU 10.3.0...

IO test fails on nosample.vcf file

2

I'm encountering an issue running the IO tests bundled with cnvkit 0.9.9. The VCF IO test seems to partially succeed but ultimately fail on the nosample.vcf file. Log below: ```...

Release tags missing

1

Please add tags corresponding to release commits, it's useful for packaging.

Previously upon reading the case of tid == mtid was detected and the sequence name mapped to "=". This causes missing sequence name errors upon decompression. As the case of...