javiercnav

adding to this thread: Is it "--long-reads" or "-long-reads" I tried: diamond blastx -d nr_dm.dmnd -q contigs.fna --outfmt 100 -o diamond_1contigs.daa --long-reads Error: Invalid option: long-reads Then I tried: diamond...

I see now that the version of diamond installed from conda is version 0.9.14, and this is what is giving the problem... Is the conda repository updated regularly?

Hello there, having the same issue here. I had to reinstall checkm2 today. Previously, I had a run that went smoothly