Jason L Weirather

Hi Shagheyegh, Sorry for the conda troubles, my best suggestion is to try the docker container if you are able: Sorry for the issues with the conda environment. Its quite...

Hi Jean-Michel, AlignQC identifies homopolymer indels from the alignment string in format such as `AAT-CCCGGTTC` - Query `AATTC-CGG--C` - Reference By decomposing the alignment into homopolymer blocks `AA` `T-` `CCC`...

Hi @emrahselli , this is not an issue I've run into myself either through this fork or through the proper polysolver software. If I were to guess at the problem,...

> do you know whether POLYSOLVER can be used for small panel data? > thanks a lot Hi @wentgithub , that's probably better directed at the polysolver authors. I would...

Hello, sorry for the slow reply to the issue. Thank you for catching this, and it has been discussed in the issues before. https://github.com/jason-weirather/hla-polysolver/issues/7#issuecomment-389284159 I apologize because I don't have...

Hi @YYasmina , I used this package two days ago and I successfully built the docker on Mac os X, and had no problem executing through the command line via...

Hi @smangul1 are you using the Conda environment to run it? I was getting at least the HLA calling to work through there. I don't think I have the courage...

@smangul1 awesome you were able to work through it! As a stop-gap I've updated the documentation in the README for Conda instructions with the command that should do exactly what...

> Can you share the error message you see? Does it halt the comfy launch? Theres no error message. It just hangs and halts the launch if it cannot reach...

> How about we make the request timeout 3 seconds I think it sounds great solution to the hang bug. Should I make a PR request that implements this? In...