Results 13 comments of jasmin.ziegler

Endless logging story.. ![grafik](https://user-images.githubusercontent.com/29899146/127837702-5094e900-4629-4c29-8620-a23ce3ef75ab.png) ![grafik](https://user-images.githubusercontent.com/29899146/127838194-ba7fbe0a-3931-46bf-8bba-920d38d1aaca.png) @markus-hinsche I am again not sure what is happening here.. I do not have duplicate log lines. @prajurock Could you please check what's the case...

@prajurock does not see duplicated log lines in his local setup. Buuuut I have bad news from the vm. While working on the new EDA notebook, I am receiving this:...

I added `logger.handlers.clear()` here ``` logger = logging.getLogger(__name__) logger.setLevel(logging.INFO) logger.handlers.clear() handler = logging.StreamHandler() handler.setFormatter(logging.Formatter('%(asctime)s - %(levelname)s - %(message)s - %(pathname)s: line %(lineno)d')) logger.addHandler(handler) ``` and now I am not seeing...

problem: we have multiple places where small amounts of test data is stored, mostly in the same place where the respective test file is placed. Idea: define a central place...

more possible solutions: - https://softwareengineering.stackexchange.com/questions/264925/where-should-i-store-test-data - https://stackoverflow.com/questions/51418211/spring-boot-what-is-the-best-strategy-to-unit-test-repository-methods

I increased our test coverage in PR #353

Dear @johngrimes, I am currently trying to work with extensions. Is this what you mean by "primitive elements"? ![image](https://github.com/aehrc/pathling/assets/29899146/5c9f2bf6-84cc-48dd-a99c-107151053505) (taken from https://simplifier.net/oncology/operation) I was expecting to be able to extract...

Hi @johngrimes, thanks for your quick reply! I might have confused the pathling fhir-server implementation and the pathling python api - is this functionality also available in the pathling python...

Awesome, thank you @johngrimes! (We are waiting for the maven artifact and are ready for testing the new and exciting features :) ) edit: @chgl found version 6.2.1 :)

Got it upgraded and installed! Nevertheless, I am getting an AttributeError: 'DataFrame' object has no attribute 'extract'. Not sure what I am missing here bec. according to this example https://pathling.csiro.au/docs/libraries/fhirpath-query,...