Jasmin Frangenberg

Updating antiSMASH to most recent bioconda version 6.1.0. ## PR checklist - [x] This comment contains a description of changes (with reason). - [x] If you've fixed a bug or...

Update antismash-lite to the most recent antiSMASH version 6.1.0. ## PR checklist -[x] This comment contains a description of changes (with reason). - [x] If you've fixed a bug or...

This is a suggestion to add the tool [fARGene](https://github.com/fannyhb/fargene/) to the hAMRonization tool list. fARGene detects AMR genes based on pre-defined HMM models (provided together with the tool). It would...

Mention AMPcombi and DRAMP database in usage.md

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### Description of feature On the current dev branch, AMPcombi and how to provide its DRAMP database with `--amp_ampcombi_db`, is not mentioned in the usage.md (as is for all other...

### Description of feature [Resfinder](https://github.com/nf-core/modules/tree/master/modules/nf-core/resfinder/run) was just added to modules – let's include it in funcscan!

### Description of feature Optimize [this usage section](https://nf-co.re/funcscan/1.1.3/docs/usage#antismash-1) in the docs: - Clarify what is necessary for the user to prepare for `--bgc_antismash_databases` and `--bgc_antismash_installationdirectory` parameters. - Make clear what...

### Description of feature This is a feature request to add an updated and well maintained version of prodigal called [Pyrodigal](https://github.com/althonos/pyrodigal). - It has exactly the same functionality as prodigal...