James A. Overton comments

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                                            James A. Overton

Coordination on project YAML schema

I think `ontology-config.yml` is better.

Add robot export to standard output products

Does `robot export` (on `master`) now have everything you need for this use case?

import external uri with its annotations

You will need to actually copy the information about BFO:0000019 (and other BFO terms you want to reuse) out of the BFO OWL file and into your OWL file. The...

Should unparsed triples be a WARN instead of ERROR?

I want to fix this OBI issue before considering downgrading this logging level. https://github.com/obi-ontology/obi/issues/1289

Should unparsed triples be a WARN instead of ERROR?

The OBI issue I wanted to fix has been fixed. What do people think about downgrading these unparsed triples to WARN?

Should unparsed triples be a WARN instead of ERROR?

Good point, but that raises a bigger question about updating OWLAPI. We've been trying to match Protege, which uses OWLAPI 4.5.9 in release 5.50. ROBOT is a bit behind, with...

Should unparsed triples be a WARN instead of ERROR?

@wdduncan Yes. These messages from the test suite are normal, but it would be nice not to see them.

Robot explain crashes upon writing the explanations to Markdown

@balhoff Any ideas about this one?

bulk load owl:Individual

Individuals have an `rdf:type` (`TYPE`). They cannot have an `rdfs:subClassOf` (`SC`). There is no need to assert than an individual is an `owl:Individual`. Something like this should work: ``` CURIE,Label,Type,Comment...

Consider packaging ROBOT with platform-specific packages

Good point @balhoff. That would save the hassle of installing Java. There would still be the hassle of putting the file on the PATH and making it executable. I guess...