James A. Overton
James A. Overton
The PURL config has now been merged: https://github.com/OBOFoundry/purl.obolibrary.org/pull/990
@cmungall and I talked about this a bit on Slack last week. @bpeters42 do you want to raise this issue on Monday's call, when you're chairing?
I don't think we can be much help with this. ROBOT just calls OWLAPI's profile validator: https://github.com/ontodev/robot/blob/master/robot-command/src/main/java/org/obolibrary/robot/ValidateProfileCommand.java#L104 I'm not surprised that the OWL profile validator does not check that `2`...
RO (and any other project) would have to opt-in by adding an `ro.owl.gz` entry to the `products` list: https://github.com/OBOFoundry/purl.obolibrary.org/blob/master/config/ro.yml#L8 The PURL code might warn about not liking the "owl.gz" extension,...
Please try adding ` --prefix "chemrof:https://w3id.org/chemrof/"` as an argument to `convert` at the end of your chain of commands: ``` ... convert --prefix "chemrof:https://w3id.org/chemrof/" \ --output chebi_sample.obo ```
Thanks for the issue and discussion! Option (b) sounds good, as long as it doesn't break existing workflows. If someone has time for a PR, that would be great. I'm...
This is still important and we do not have a resolution.
This other issue seems relevant? https://github.com/obi-ontology/obi/issues/1760
Thanks for the issue! I think we can help with some of these points but not all. - OBI is part of the [OBO Foundry](http://obofoundry.org/) community of ontologies, and we...
This will be addressed by COB integration work, e.g. WIP #1834.