James Cranley

i have the same issue. will try to downgrade to Matrix version = 1.6_1.1

With my ArchR conda environment active I ran: `conda install -c conda-forge r-matrix=1.6_1.1` This seems to have fixed it.

any news on this? I am also experiencing the same error (mine is when running `mvi.train()`)

PS I tried with the same code and same object using an old environment (with scvi 0.2.3 installed) and it ran. the env where I was getting this error had...

with the environment which previously gave this issue activated, I ran: ```bash pip uninstall scvi-tools pip install scvi-tools==0.20.3 ``` then restarted the kernel and the notebook ran without error.

thanks @emdann , i had this error today for the first time. I've used this milopy function in another conda env with no issues. is it something to do with...

Hi, you've linked to an article which basically suggests we pin numpy to a version < 2. However 1) if this is your suggestion, you haven't updated the yaml accordingly...

I installed scArches 1) Using pip (in a clean Python 3.10 conda environment) 2) Using conda and your official yaml In both cases I get the same error as @cjuigne...

Thank you @longmanz , installing with python 3.9 works for me too (but not 3.10+)