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                                            jaisonjseq

bcftools view -R is excluding regions in bed file

I want the opposite of -R, where all regions except those listed in file.txt are extracted. What is the best option available in bcftools?

bcftools view -R is excluding regions in bed file

Thank you for the swift response! Jaison Sequeira Dept. of Applied Zoology Mangalore University On Wed, 7 Aug, 2024, 23:05 Petr Danecek, ***@***.***> wrote: > This should work --targets-file ^file.txt,...