Jake Pennington

Results 102 comments of Jake Pennington

Yes, parameters are documented in `kilosort.parameters.py`. You can also see the same information by mousing over the parameter name in the GUI for about half a second. The default value...

Related to #632

@Virginia9733 is D:\ a network drive for you, or something along those lines?

If you're using conda to manage your environment, you can type `conda list kilosort` in the terminal to see the version. As for only two shanks showing, can you paste...

@Virginia9733 All of your contacts in that probe layout are from a single shank (you're seeing the two columns that are 32um apart), not spread out over 4 shanks. We...

@Virginia9733 Another note: the newest version (4.0.4) should fix the multi-shank issues we were seeing, so that vertically stacking shanks is not necessary.

I'm going to close this for now. If you continue to have issues with the latest version, please let us know and we can re-open this.

Hello, thanks for reporting this. Unfortunately it was not a simple case of variables being swapped, "amp" is actually generated by Phy and not something that we report directly. ~~We've...

Okay, this has been resolved with the changes pushed today, I'll add it to a new pip version soon. For @hoyeon912 and anyone else that comes across this, please note...

Hello, Please try sorting this again after installing the latest version of Kilosort (v4.0.4), with the default batch size and `dminx = 10`. The memory issue is likely related to...