j-gerb

> > > Hi Colin, > > You were right. Once I corrected the values in acqparams.txt, the issue went away. Thank you for your help! > > Jayashree Just...

> > > Hi Johannes, > > I followed the github-synb0-readme because I do not have reverse PE direction diffusion images. The synthetic b0 that is generated by the docker...

Nevermind, I just saw how in the Readme it is suggested to use the same file.  I'm still not convinced that I'm doing everything right, this would be my...

Hey Colin, Thanks so much for helping me out here. This is the raw b0:  Here's b0_all (with 0 -1 0 0.0000 as the second line of the acqparams.txt,...

This is the output of fslhd on the b0 I use as input: ``` sizeof_hdr 348 data_type UINT16 dim0 3 dim1 122 dim2 122 dim3 65 dim4 1 dim5 1...

Thank you so much! I have to check with my Professor if it's ok to send out an anonymized version, I'll let you know tomorrow. Best, Johannes

Dear Colin, Thanks a lot for the quick and helpful reply, this will be very useful. All the best, Johannes