Ivo Kwee

Drug connectivity give "incorrect number of dimensions" if dataset has only 1 comparison. [Axel GSE166321]

The Cell profiling module gives a red "N must be at least 2" error on Koen's dataset (AZstL). See screenshot below. 

Reduce/remove/replace large R packages from docker

5

If we look at the installed R packages in the docker, they occupy about 4GB space. You can show the largest packages by using `du -h -d1 /usr/local/lib/R/site-library/ | sort...

Currently the number of visits to the nav tabs are counted for each session. We would like to count the visits/clicks for the subtabs in each board module. This can...

In running the OPG on DNAnexus, we got a lot of char encoding warning of special symbols like beta, gamma, delta. I just wonder how we should tackle that. Lots...

Runtime and memory profiling from logs

2

We can profile startup time for different stages at startup and memory usage during startup from the log files. This enable us to compare different versions and different deployments. Below...

shorten long table entries

2

**Problem**: In many table we have long descriptions that force the table to be very wide or overflow. **possbile solution**: In some table we have truncated the descriptions, a better...

Request a slider/carousel inside a modal window like below. With perhaps image on top and multi page scrolling. This would be good for a "What's new" or multiple message at...

All YouTube modals should show xl large screen video + adding alert box in each module.

3

All YouTube help modals should show just the video without text in xl screen. See example Load Dataset below. The text can be moved (with editing) into an bootstrap alertbox....

if statement in run_fastqc.R

1

Hi. I think in the file run_fastqc.R this `if(!dir.exists("fastqc"))` should be `if(!dir.exists(paste0(destdir,"/fastqc")))`