Ivo Kwee

Same for CSS. Maybe @mauromiguelm can do that?

Not sure if these artifical JS clicks are the way to do things, rather than directly editing the elements/class. Looks more like a hack... but hey it works....

Is this done? @ESCRI11 If most of it is mostly done, we can close this issue and still work on it gradually.

closing stale issue. perhaps in mean time already done by xavier.

In the pgx object there used to be, or still is, pgx$samples and pgx$Y. The latter should be a cleaner and discretized version of the former. I try to keep...

Yes. There is code somewhere that tries to intelligently detect CV or Discrete var. Not always robust. But such a code is very important for creating auto contrasts.

closing stale issue.

I don't like the reporting thing. Before that we should investigate why the links are not working. You do not need to check 2000 links manually, you can create a...

I don't like asking users to actively debug dead links. Looks like we ship broken stuff. Better disable the link. Again, we could just test each link in a loop...

So you can grep on 'geneset not found'... But again I think we should find out why a certain gene set is not found: any extra spaces? Newline? Non UTF8...