Zheng An

Results 12 comments of Zheng An

> Well any example data would be gratefully received. I'm trying to come up with a method that can restrict memory without slowing things down too much. Hi @whitwham ,...

> > The solution I come up with is that I can separate my huge bam (30T) into multiple small bam files (~50G) by chromosome or lines and do samtools...

> Hi, there is not currently an easy way to do this, although I agree that this is a necessary label to add to the output, and I plan to...

Hi Jamal, Did you solve your problem? I recently ran into the same situation. What's your explanation? Thanks.

Thank you. I recently read the preprint of Whipplet and I think the definition of node is explained better than the final paper, where TE and TS are regarded as...

Hi Jamal, Sorry for the late reply. **Did you observe the same thing in your dataset?** Yes I also noticed these significant events. I think considering these as true events...

Hi Jamal, I believe what you discovered is called "Microexon" ( I'm not familiar with this so please tell me if I'm wrong). Here are the links: https://www.biostars.org/p/261324/ Best, Zheng

Hi @aleighbrown aleighbrown and @timbitz timbitz recently I need to find novel junction from almost 30,000 samples. Any good advice on me please?