clustergrammer2-notebooks

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Error running Predict Cell Types using CIBERSORT Signatures on Binder

1

Section: # Predict Cell Types using CIBERSORT Signatures Error: AttributeError: 'Series' object has no attribute 'get_values'

moqri

PBMC scRNA CIBERSORT gene signatures indexing error

1

Following error when I try to run the PBMC-scRNA notebook: ``` /clustergrammer_fun/categories.py in dict_cat(net, define_cat_colors) 131 for inst_full_name in inst_dict: 132 --> 133 inst_name = inst_full_name.split(': ')[1] 134 inst_color =...

oHunewald

http://software.broadinstitute.org/gsea/msigdb/supplementary_genesets.jsp

cornhundred

bqplot not working in jupyter lab

1

https://github.com/bloomberg/bqplot/issues/884

cornhundred

10X released a dataset of ~100K CD8 T Cells, we should make an example notebook working with this data. We need to be careful to not add too much data...

cornhundred

Make a MNIST (and fashion MNIST) example with a heatmap and a bqplot widget that shows selected digits or selected pixels as images. We will have the bqplot widget observe...

cornhundred

There are additional data types available for the 1,037 cancer cell lines from the CCLE. Try adding another data type to the example to show how we can work with...

cornhundred

Error displaying widget: model not found

1

I was following the notebook: ``` net.load_df(df) net.widget() Error displaying widget: model not found ``` Any ideas?

brianpenghe