Isaak Yosief Tecle

make standalone correlation analysis tool

3

-- also modular enough so it can be integrated in the mixed modelling pipeline -- make it work with Datasets

Add studyName to Genotype data from dataset

1

When creating a dataset of select accessions from multiple trials, using the wizard, it would be useful to include the studyName field in the genotype data output. In some cases,...

Expected Behavior -------------------------------------------------------------------------- For Bugs: --------- ### Environment #### Steps to Reproduce

create a new breedbase email address and add to the contact pages

4

Expected Behavior -------------------------------------------------------------------------- -- perhaps a gmail to take advantage of its spam filtering. For Bugs: --------- ### Environment #### Steps to Reproduce

SGN: user profile page is blank

4

Expected Behavior --------------------------------------------------------------------------  For Bugs: --------- ### Environment #### Steps to Reproduce

Expected Behavior -------------------------------------------------------------------------- - [ ] NaCRRI - [ ] IITA - [ ] NCRI - [ ] TARI For Bugs: --------- ### Environment #### Steps to Reproduce

add hapmap format download option

1

Expected Behavior -------------------------------------------------------------------------- -- users from IITA are downloading genotype data from cassavabase in vcf format and then converting it to hapmap using TASSEL. For Bugs: --------- ### Environment ####...

Handling different data levels in the same trial

1

Expected Behavior -------------------------------------------------------------------------- -- Some trials have data at plot and plant levels. How to handle the mix? It seems querying for one data level values excludes traits measured at...

display lists and datasets using datatable in analysis tools

3

Expected Behavior -------------------------------------------------------------------------- - [x] PCA - [x] Clustering - [x] Kinship - [x] Correlation - [ ] solGS For Bugs: --------- ### Environment #### Steps to Reproduce

Expected Behavior -------------------------------------------------------------------------- -- accidental spaces before and/or after username give login error... For Bugs: --------- ### Environment #### Steps to Reproduce