Brendan Innes

Same problem here: ``` > library(cmapR) > lvl4_data R.version _ platform x86_64-pc-linux-gnu arch x86_64 os linux-gnu system x86_64, linux-gnu status major 4 minor 0.3 year 2020 month 10 day 10...

I used `cmapR::parse.gctx()` just fine with R4.0.2 last spring, so its must be a relatively new bug.

Hi Paul, Issue #39 refers to that problem. It just cropped up recently, and I'm in the midst of tracking down the cause. In the meantime, toggling inputs as you...

See https://arxiv.org/pdf/1407.1176.pdf and http://www-ikn.ist.hokudai.ac.jp/~arim/papers/komikdd2017draft.pdf

This should probably be combined with the ability to restrict testing to gene sets (ie TFs, surface proteins),

Can't be replicated on a linux machine. Bugs occur with newly generated seurat v3 input data from BorrettNSC/ as well, but only on Windows.

Replicated on linux after building package in RStudio. Not consistently though.