microenvironment topic

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

sqjin

EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.

digitalcytometry

R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of mali...

AntonioDeFalco

Code for ICLR 2024 (Spotlight) paper "MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding"

LirongWu

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

jinworks