copy-number topic

List copy-number repositories

PureCN

120
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31
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Copy number calling and variant classification using targeted short read sequencing

ichorCNA

156
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84
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Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

segment-liftover

23
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4
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Lifterover copy number segments in whole

MSK-GRAIL-TECHVAL

21
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10
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High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants

Accucopy

15
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4
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Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data.