alternative-splicing topic
altanalyze
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available fro...
Whippet.jl
Lightweight and Fast; RNA-seq quantification at the event-level
brie
BRIE: Bayesian Regression for Isoform Estimate in Single Cells
psichomics
Interactive R package to quantify, analyse and visualise alternative splicing
rnasplice
rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
Sierra
Discover differential transcript usage from polyA-captured single cell RNA-seq data
PEGASAS
Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)