Mark Keller

Related to #1303

Hi @DippedPretzels, it looks like this image does not have the [`omero`](https://ngff.openmicroscopy.org/latest/#omero-md) field in the root `.zattrs` file. https://lstest1.s3.us-east-2.amazonaws.com/my-first.ome.zarr/.zattrs vs https://minio-dev.openmicroscopy.org/idr/v0.3/idr0062-blin-nuclearsegmentation/6001240.zarr/.zattrs Apologies that this is not well documented (and this...

Hi @DippedPretzels I just realized that there is a new spec for OME-NGFF (v4.0) that changed part of the JSON schema. Until this new version is supported in [viv](https://github.com/hms-dbmi/viv/issues/586) (and...

One option would be to transpose the axes after reading the image ```python3 import numpy as np my_image = imread("my_image.tif") my_image = np.transpose(my_image, axes=(1, 0, 3, 2)) # zcxy to...

Related to #1126

Also related to simplifying exports for plugin components. Currently plugins need to copy-and-paste or reimplement lots of functionality just to extend built-in components like the Scatterplot. See #1285. I am...

Thanks! I will look into these

Good idea, just made the `vitessce` org and invited @manzt, @mccalluc, @ilan-gold, @ngehlenborg

I think the tests should not depend on a zarr store served via HTTP. Instead, it should be mocked at a different level. For instance, using a mocked zarr store...

This commit https://github.com/vitessce/vitessce/pull/1160/commits/b5a8b7a53df27d318e7a75876d13b05ef38ea651 aims to be a temporary fix.